Pigeons Can Learn to Accurately Spot Cancerous Breast Cells

(p. C4) . . . researchers at the University of California, Davis, the University of Iowa and Emory University have demonstrated that pigeons are surprisingly good at detecting cancer as well. Using grain as a reward, the scientists managed to train hungry pigeons to reliably spot malignancies in images of human breast cells.

The birds achieved roughly 85% accuracy, which is probably better than beginning medical students, the scientists said, although it doesn’t approach the prowess of seasoned pathologists. On the other hand, the birds’ training only involved 24 slides at four times magnification (and they graduated debt-free). What’s more, when Edward A. Wasserman and his colleagues exploited the “wisdom of flocks” by combining the “votes” of four pigeons on each slide, the birds’ accuracy shot up to an astonishing 99%.

When confronted with mammograms, by contrast, the pigeons were flummoxed. After awhile, they seemed to learn to detect cancer on these images, but when shown new ones, they couldn’t do any better than chance, which implies that they had simply memorized the right calls on the initial images during repeated viewings. By contrast, birds that learned to pick out cancer from tissue samples could carry over their skills to new images.

Why so good with images of actual tissue yet so bad with mammograms? The former consist of breast cells seen under a microscope, while the latter are murkier images of overlapping elements (such as blood vessels) within the breast. Like physicians, pigeons find it easier to make the diagnosis by looking at cells, which is why biopsies are taken.

For the full commentary see:

Daniel Akst. “R&D; Pigeons That Spot Breast Cancer.” The Wall Street Journal (Saturday, Dec. 12, 2015 [sic]): C4.

(Note: ellipsis added.)

(Note: the online version of the commentary has the date Dec. 11, 2015 [sic], and has the title “R&D; The Pigeons That Can Spot Breast Cancer.”)

The research summarized in the passages quoted above, was published in the academic article:

Levenson, Richard M., Elizabeth A. Krupinski, Victor M. Navarro, and Edward A. Wasserman. “Pigeons (Columba Livia) as Trainable Observers of Pathology and Radiology Breast Cancer Images.” PLOS ONE 10, no. 11 (2015): e0141357.

The Effect of Global Warming on Tropical Islands “Is Not an Exact Science”: Many Islands Are Stable or Even Growing

Environmentalists warned for decades that the biggest threat from global warming is to the survival of small low-lying islands. But as the late great physicist Freeman Dyson observed, the earth is more resilient than we know. In the three-full-page article quoted below, The New York Times (yes, The New York Times) reports that the small low-lying islands are mostly doing just fine.

(p. A6) On a wisp of land in the Indian Ocean, two hops by plane and one bumpy speedboat ride from the nearest continent, the sublime blue waves lapping at the bone-white sand are just about all that breaks the stillness of a hot, windless afternoon.

The very existence of low-slung tropical islands seems improbable, a glitch. A nearly seamless meeting of land and sea, peeking up like an illusion above the violent oceanic expanse, they are among the most marginal environments humans have ever called home.

And indeed, when the world began paying attention to global warming decades ago, these islands, which form atop coral reefs in clusters called atolls, were quickly identified as some of the first places climate change might ravage in their entirety. As the ice caps melted and the seas crept higher, these accidents of geologic history were bound to be corrected and the tiny islands returned to watery oblivion, probably in this century.

Then, not very long ago, researchers began sifting through aerial images and found something startling. They looked at a couple dozen islands first, then several hundred, and by now close to 1,000. They found that over the past few decades, the islands’ edges had wobbled this way and that, eroding here, building there. By and large, though, their area hadn’t shrunk. In some cases, it was the opposite: They grew. The seas rose, and the islands expanded with them.

. . .

(p. A7) It was Darwin who first theorized that atolls were burial sites for dead volcanoes, that these modest, almost shy, formations had astonishing pasts. Only later did scientists discover a key piece of their more recent history: Swings in sea level, they realized, had drowned and exposed the islands several times through the ages. Which didn’t bode particularly well for them today, now that global warming was causing the oceans’ rise to speed up.

To understand what had happened to the atolls since this acceleration began, two researchers, Arthur Webb and Paul Kench, decided to look down at them from above. The scientists collected aerial photos of 27 Pacific islands from the middle of the 20th century. Then, they compared them to recent satellite images. “I’m not sure we really knew what we would find,” Dr. Kench recalled.

Their findings caused an uproar.

The seas had risen an inch or so each decade, yet the waves had kept piling sediment on the islands’ shores, enough to mean that most of them hadn’t changed much in size. Their position on the reef might have shifted. Their shape might be different. Whatever was going on, it clearly wasn’t as simple as oceans rise, islands wash away.

Dr. Webb and Dr. Kench’s study, which came out in 2010, inspired other scientists to hunt for more old photos and conduct further analysis. The patterns they’ve uncovered in recent years are remarkably consistent across the 1,000 or so islands they’ve studied: Some shrank, others grew. Many, however, were stable. These studies have also added to the intrigue by revealing another pattern: Islands in ocean regions where sea level rise is fastest generally haven’t eroded more than those elsewhere.

And yet, to really grasp the forces at work, and to anticipate what they might do to the islands next, scientists also need to study atolls up close. Which is why Dr. Kench came back this spring to the Maldives.

On a blob of jungly land just a few miles north of the Equator, Dr. Kench walked past a section of beach that the currents had eaten away. Several palm trees lay toppled, half-buried in the sand.

“People obsess on that end of the island,” he said. Then he pointed up ahead. “This side has got bigger.”

SCIENCE AS ‘DETECTIVE WORK’

The day before, another island in the same atoll was abuzz with activity. One group of scientists and graduate students measured currents using makeshift buoys. Another group fiddled with a tower-mounted sensor that mapped the waves running up the beach. A third team dove down to the seafloor, where they installed instruments within the intricate coral canyons that, from above, gave the reef its streaky, ethereal look.

One doctoral researcher, Aitana Gea Neuhaus, scooped up a spadeful of sand and beheld the miniature universe it contained: puzzle-piece fragments of coral and calcareous algae in a mad variety of shapes and textures; crushed shells of bivalves, crustaceans and single-celled foraminifera; the sugar-white sand particles that parrotfish churn out of their digestive tracts.

. . .

One morning, Dr. Kench and a few other researchers hacked away a clearing in the jungle and bored a hole in the ground. Down went a six-foot steel pipe.

They were trying to glimpse the island’s deep past, to reconstruct its major chapters, layer by ancient layer. And they had some idea of how far below ground to look, thanks to seismic measurements that Tim Scott, an ocean scientist at Plymouth, had taken. Still, he warned the group: “It’s not an exact science.”

Dr. Scott sledgehammered the pipe down. “This is the moment of truth,” Dr. Kench said.

They levered out the pipe and hoisted it above a tarp. Out came a messy line of sediment and gravel and coral bits. Everyone leaned in close. No group of people in human history had ever seemed more interested in some chunks of damp sand.

Dr. Scott tried to puzzle out why the fine and rough material were jumbled together, not crisply layered as they’d hoped. Gerd Masselink, a coastal scientist at Plymouth, grinned. “Well, you know, it’s not an exact science,” he said.

. . .

On its own, coral bleaching isn’t necessarily bad for islands. When corals go white and frail, they can become infested (p. A8) by even more of the cyanobacteria that parrotfish love to munch on. The parrotfish flourish; they produce more sand.

. . .

It’s . . . less-populated islands where scientists say people can still learn to coexist with expanding and contracting shores, to adapt to nature’s give-and-take.

The issue is whether people can wait. Whether their needs for modern services, for better lives, will lead them to demand sea walls and breakwaters and land reclamation, the very things that could diminish the islands’ natural resilience. Or whether they will simply leave.

For the full story see:

Raymond Zhong, Jason Gulley and Jonathan Corum. “The Vanishing Islands That Failed to Vanish.” The New York Times (Saturday, June 29, 2024): A6-A8.

(Note: ellipses added; capitalized heading in original.)

(Note: the online version of the story has the date June 26, 2024, and has the same title as the print version.)

The Joy of the Smell Test

If actionable knowledge can come for several sources, but we forbid action based on some of those sources, we will limit our effective action. In the case of health, unnecessary suffering and death will result. In previous entries I highlighted cases where dogs’ advanced ability to smell can diagnose and warn of human maladies more accurately, quicker, and cheaper than other methods. Dog-detectable maladies include Covid, epileptic seizures, and cancer. But the medical establishment underuses this source of knowledge because it is not viewed as scientifically respectable. (And perhaps also because those who practice scientifically respectable ways of knowing, benefit from limiting competition?) The passages quoted below sketch the story of a “hyperosmic” nurse who can smell a distinct odor that identifies those who have and who will have Parkinson’s. Note that follow-up research on this outside-the-box diagnostic method was not funded by governments or universities but by a private foundation founded and funded by Parkinson’s patients and their families and friends. Having a terrible disease sometimes leads to despair, sometimes to a sense of urgency.

(p. 30) As a boy, Les Milne carried an air of triumph about him, and an air of sorrow.  . . .  “We were very, very much in love,” Joy, now a flaxen-haired 72-year-old grandmother, told me recently. In a somewhat less conventional way, she also adored the way Les smelled, and this aroma of salt and musk, accented with a suggestion of leather from the carbolic soap he used at the pool, formed for her a lasting sense of who he was. “It was just him,” Joy said, a steadfast marker of his identity, no less distinctive than his face, his voice, his particular quality of mind.

Joy’s had always been an unusually sensitive nose, the inheritance, she believes, of her maternal line. Her grandmother was a “hyperosmic,” and she encouraged Joy, as a child, to make the most of her abilities, quizzing her on different varieties of rose, teaching her to distinguish the scent of the petals from the scent of the leaves from the scent of the pistils and stamens. Still, her grandmother did not think odor of any kind to be a polite topic of conversation, and however rich and enjoyable and dense with information the olfactory world might be, she urged her granddaughter to keep her experience of it to herself.

. . .

Les spent long hours in the surgical theater, which in Macclesfield had little in the way of ventilation, and Joy typically found that he came home smelling of anesthetics, antiseptics and blood. But he returned one August evening in 1982, shortly after his 32nd birthday, smelling of something new and distinctly unsavory, of some thick must. From then on, the odor never ceased, though neither Les nor almost anyone but his wife could detect it.  . . .

Les had lately begun to change in other ways, however, and soon the smell came to seem almost trivial. It was as if his personality had shifted. Les had rather suddenly become detached, ill-tempered, apathetic. He ceased helping out with many household chores; he snapped at his boys.

. . .

When he began referring to “the other person,” a shadow off to his side, she suspected a brain tumor. Eventually she prevailed upon him to see his doctor, who referred him to a neurologist in Manchester.

Parkinson’s disease is typically classed as a movement disorder, and its most familiar symptoms — tremor, rigidity, a slowing known as bradykinesia — are indeed motoric. But the disease’s autonomic, psychological and cognitive symptoms are no less terrible and commonly begin during the so-called prodrome, years before any changes in movement.

. . .

(p. 31) Feeling desperate, Joy eventually persuaded Les to go with her to a meeting of local Parkinson’s patients and their caregivers.

The room was half full by the time they arrived. Near the coat stand, Joy squeezed behind a man just as he was taking off his jacket and suddenly felt a twitch in her neck, as if some fight-or-flight instinct had been activated, and she raised her nostrils instinctively to the air. She often had this reaction to strong, unexpected scents. In this case, bizarrely, it was the disagreeable odor that had hung about her husband for the past 25 years. The man smelled just like him, Joy realized. So too did all the other patients. The implications struck her immediately.

For nearly all the recorded history of medicine and until only quite recently, smell was a central preoccupation. The “miasma” theory of disease, predominant until the end of the 19th century, held that illnesses of all kinds were spread by noxious odors. By a similar token, particular scents were understood to be curative or prophylactic. More than anything, however, odor was a tool of diagnosis.

The ancients of Greece and China confirmed tuberculosis by tossing a patient’s sputum onto hot coals and smelling the fumes. Typhoid fever has long been known to smell of baking bread; yellow fever smells of raw meat. The metabolic disorder phenylketonuria was discovered by way of the musty smell it leaves in urine, while fish-odor syndrome, or trimethylaminuria, is named for its scent.

. . .

(p. 33) Most diseases can be identified by methods more precise and ostensibly scientific than aroma, however, and we tend to treat odor in general as a sort of taboo. “A venerable intellectual tradition has associated olfaction with the primitive and the childish,” writes Mark Jenner, a professor of history at the University of York. Modern doctors are trained to diagnose by inspection, palpation, percussion and auscultation; “inhalation” is not on the list, and social norms would discourage it if it were.

During her time as a nurse, Joy had done it anyway, reflexively, and learned to detect the acetone breath that signaled an impending diabetic episode, the wet brown cardboard aroma of tuberculosis — “not wet white cardboard, because wet white cardboard smells completely different,” she explained — or the rancidness of leukemia. The notion that Parkinson’s might have a distinctive scent of its own had not occurred to her then, but when it did occur to her years later, it was hardly exotic.

She and Les worried that the normosmics of the world, unfamiliar with medical smells and disinclined to talk about odor in general, might not take her discovery very seriously. They searched for an open-minded scientist and after several weeks settled on Kunath, the Parkinson’s researcher at the University of Edinburgh. In 2012, Joy attended a public talk he gave. During the question-and-answer session, she stood to ask, “Do people with Parkinson’s smell different?” Kunath recalls. “I said, ‘Do you mean, Do people with Parkinson’s lose their sense of smell?’” (Smell loss is in fact a common early symptom of the disease.) “And she said: ‘No, no, no. I mean, Do they smell different?’ And I was just like, ‘Uh, no.’” Joy went home. Kunath returned to his usual work.

Six months later, however, at the urging of a colleague who had once been impressed by cancer-sniffing dogs, Kunath found Joy’s name and called her. She told him the story of Les’s new smell. “I think if she’d told me that, as he got Parkinson’s, he had a change in smell, or if it came afterwards, I probably wouldn’t have followed up any more,” Kunath told me. “But it’s this idea that it was years before.”

He called Perdita Barran, an analytical chemist, to ask what she made of Joy’s claims. Barran suspected Joy was simply smelling the usual odor of the elderly and infirm and misattributing it to Parkinson’s. “I knew, because we all know, that old people are more smelly than young people,” says Barran, who is now a professor of mass spectrometry at the University of Manchester. Still, Barran was personally acquainted with the oddities of olfaction. Following a bike accident, she had for several years experienced various bizarre distortions to her own sense of smell. The idea that Joy might be capable of experiencing odors that no one else could did not strike her as entirely outlandish.

She and Kunath ran a small pilot study in Edinburgh. Through Parkinson’s UK, they recruited 12 participants: six local Parkinson’s patients and six healthy controls. Each participant was asked to wear a freshly laundered T-shirt for 24 hours. The worn shirts were then cut in half down the center, and each half was placed in its own sealed plastic bag. Kunath oversaw the testing. Joy smelled the T-shirt halves at random and rated the intensity of their Parkinsonian odor. “She would find a positive one, and would say, ‘There — it’s right there. Can you not smell it?’” Kunath recalled. Neither he nor the graduate student assisting him could smell a thing.

Kunath unblinded the results at the end of the day. “We were on a little bit of a high,” he recalled. Not only had Joy correctly identified each sample belonging to a Parkinson’s patient, but she was also able, by smell, to match each sample half to its partner. Barran’s skepticism evaporated. Still, Joy’s record was not perfect. She had incorrectly identified one of the controls as a Parkinson’s patient. The researchers wondered if the sample had been contaminated, or if Joy’s nose had simply gotten tired. By Barran’s recollection, Kunath’s response was: “It’s fine! It’s one false positive!” Barran herself was slightly more cautious: Joy had mislabeled both halves of the man’s T-shirt.

Of more immediate interest, though, was the question of what was causing the smell in the first place. The odor seemed to be concentrated not in the armpits, as the researchers had anticipated, but at the neckline. It took them several weeks to realize that it perhaps came from sebum, the lipid-rich substance secreted by the skin. Sebum is among the least studied biological substances. “It is actually another waste disposal for our system,” Barran says. “But no one had ever thought that this was a bodily fluid we could use to find out about disease.”

Barran set out to analyze the sebum of Parkinson’s patients, hoping to identify the particular molecules responsible for the smell Joy detected: a chemical signature of the disease, one that could be detected by machine and could thus form the basis of a universal diagnostic test, a test that ultimately would not depend on Joy’s or anyone else’s nose. No one seemed to be interested in funding the work, though. There were no established protocols for working with sebum, and grant reviewers were unimpressed by the tiny pilot study. They also appeared to find the notion of studying a grandmother’s unusual olfactory abilities to be faintly ridiculous. The response was effectively, “Oh, this isn’t science — science is about measuring things in the blood,” Barran says.

Barran turned to other projects. After nearly a year, however, at a Parkinson’s event in Edinburgh, a familiar-looking man approached Kunath. He had served as one of the healthy controls in the pilot study. “You’re going to have to put me in the other category,” he said, according to Kunath. The man had recently been diagnosed with Parkinson’s. Kunath was stunned. Joy’s “misidentification” had not been an error, but rather an act of clairvoyance. She had diagnosed the man before medicine could do so.

Funding for a full study of Joy, the smell and its chemical components now came through. “We saw something in the news, and we thought, Wow, we’ve got to act on that!” says Samantha Hutten, the director of translational research at the Michael J. Fox Foundation. “The N.I.H. is not going to fund that. Who’s going to fund it if not us?”

. . .

(p. 51) Joy has enjoyed her fame, but the smell work also radicalized her, in its way, and she has a reputation for being a bit intransigent in her advocacy. The initial scientific skepticism toward her was of a piece, she thought, with what she already held to be the medical corps’s hopeless wrongheadedness about Parkinson’s disease. For Joy, as for many caregivers, the psychological aspects of the illness were by far the most difficult to manage, much less accept, and these happened to be precisely the symptoms neurologists seemed least interested in acknowledging, let alone addressing.  . . .

To Joy’s mind, still more proof of this medical obstinacy came from the discovery that she was not alone in her ability to smell Parkinson’s disease. When the research first began to attract attention in the media, Barran and Kunath received messages from around the world from people reporting that they, too, had noticed a change in the smell of their loved ones with Parkinson’s.
  . . .  But for the smell taboo, Joy thought, someone somewhere might have taken these people seriously, and the importance of the odor might have been realized decades sooner.

For the full story see:

Scott Sayare. “The Smell Test.” The New York Times Magazine (Sunday, June 16, 2024): 28-33, 51 & 53.

(Note: ellipses added; bold in original.)

(Note: the online version of the story has the date June 3, 2024, and has the title “The Woman Who Could Smell Parkinson’s.”)

“Troublemaker” Finally Convinced Peers That Hub Trees Distribute Resources to Kin

(p. C7) Over the years, Ms. Simard encountered no shortage of pushback. Government bureaucrats were reluctant to spend money on her recommendations. Her managers resisted changing their forestry models and perhaps “couldn’t listen to women,” labeling her a “troublemaker.” Fellow scientists challenged her research methods. This last may have originated in envy, but ultimately is an important part of the scientific process—after all, without stringent vetting, we might still believe that Vulcan is, indeed, a planet. Today Ms. Simard’s research is widely accepted. We now know that through fungal networks trees share resources, that mature trees (what she calls “hub trees” in her research, and “mother trees” when speaking to popular audiences) support seedlings, favor their kin and distribute resources, even in death. It’s a radical new understanding of plants.

For the full review, see:

Eugenia Bone. “Seeing the Forest.” The Wall Street Journal (Saturday, May 8, 2021 [sic]): C7.

(Note: the online version of the review has the date May 7, 2021 [sic], and has the title “‘Finding the Mother Tree’ Review: Seeing the Forest.”)

The book under review is:

Simard, Suzanne. Finding the Mother Tree: Discovering the Wisdom of the Forest. New York: Knopf, 2021.

Endo Applied His Practical Knowledge of Molds to Search for First Statin

(p. 24) Akira Endo, a Japanese biochemist whose research on fungi helped to lay the groundwork for widely prescribed drugs that lower a type of cholesterol that contributes to heart disease, died on June 5 [2024]. He was 90.

. . .

Dr. Endo said his career was also inspired by a biography he read of Alexander Fleming, the Scottish biologist who discovered penicillin in the 1920s.

“For me Fleming was a hero,” he told Igaku-Shoin, a Japanese medical publisher, in 2014. “I dreamed of becoming a doctor as a child, but realized a new horizon as people who are not doctors can save people’s lives and contribute to society.”

After studying agriculture at Tohoku University, he joined Sankyo, a Japanese pharmaceutical company, in the late 1950s. His first assignment was manufacturing enzymes for fruit juices and wines at a factory in Tokyo.

He developed a more efficient way of cultivating mold by applying a method he had used as a child to make miso and pickled vegetables, he later told M3, a website for Japanese medical professionals.

. . .

. . ., he grew more than 6,000 fungi in the early 1970s as part of an effort to find a natural substance that could block a crucial enzyme involved in the production of cholesterol.

“I knew nothing but mold, so I decided to look for it in mold,” he said.

He eventually found what he was looking for: a strain of penicillium, or blue mold, that, in chickens, reduced levels of an enzyme that cells need to make LDL cholesterol.

For the full obituary see:

Hisako Ueno and Mike Ives. “Akira Endo, Scholar of Statins, Is Dead at 90.” The New York Times (Sunday, June 16, 2024): 24.

(Note: ellipses, and bracketed year, added.)

(Note: the online version of the obituary was updated June 15, 2024, and has the title “Akira Endo, Scholar of Statins That Reduce Heart Disease, Dies at 90.”)

Alert Children Make “Staggering Discovery” That “Advances Science”

(p. D2) In the summer of 2022, two boys hiking with their father and a 9-year-old cousin in the North Dakota badlands came across some large bones poking out of a rock. They had no idea what to make of them.

The father took some photos and sent them to a paleontologist friend. Later, the relatives learned they’d made a staggering discovery: They’d stumbled upon a rare juvenile skeleton of a Tyrannosaurus rex.

. . .

The friend of the father who identified the fossil, Tyler Lyson, who is the museum’s curator of paleontology, said in a statement that the boys had made an “incredible dinosaur discovery that advances science and deepens our understanding of the natural world.”

. . .

In a video, the brothers, Jessin and Liam Fisher, 9 and 12, and their cousin, Kaiden Madsen, now 11, said that they were busy hiking and exploring when they first came across the bones and had no inkling they could be so special. “I didn’t have a clue,” Jessin says in the video. At first, he added, Dr. Lyson believed they belonged to a duck-billed dinosaur.

For the full story see:

Livia Albeck-Ripka. “Family Discovery: Stumbling Upon a Tyrannosaurus Rex In the Badlands of North Dakota.” The New York Times (Tuesday, June 11, 2024): D2.

(Note: ellipses added.)

(Note: the online version of the story was updated June 10, 2024, and has the title “Family Discovers Rare T. Rex Fossil in North Dakota.” Where the wording of the versions differs, the passages quoted above follow the online version.)

The study co-authored by Camarós, and mentioned above, is:

Tondini, Tatiana, Albert Isidro, and Edgard Camarós. “Case Report: Boundaries of Oncological and Traumatological Medical Care in Ancient Egypt: New Palaeopathological Insights from Two Human Skulls.” Frontiers in Medicine 11 (2024) DOI: 10.3389/fmed.2024.1371645.

On the antiquity of cancer, see also:

Haridy, Yara, Florian Witzmann, Patrick Asbach, Rainer R. Schoch, Nadia Fröbisch, and Bruce M. Rothschild. “Triassic Cancer—Osteosarcoma in a 240-Million-Year-Old Stem-Turtle.” JAMA Oncology 5, no. 3 (March 2019): 425-26.

The Dubious Result of a Randomized Controlled Trial (RCT)

Randomized controlled trials are widely viewed as the “gold standard” of medical evidence. But RCTs can be flawed in a variety of ways. They can have too few participants, they can be improperly randomized for a variety of reasons (not all relevant variables may have been identified or the protocol may not have been properly implemented). Forgive me, but the results of the RCT described below seem highly implausible. I believe that something about the RCT was flawed. Who can believe the result that those who engage in moderate exercise live shorter lives than those who only engage in very modest exercise. Common sense and many observational studies say the opposite, and such evidence should not be cavalierly dismissed.

(p. D6) Scientists have known for some time, . . ., that active people tend also to be long-lived people. According to multiple past studies, regular exercise is strongly associated with greater longevity, even if the exercise amounts to only a few minutes a week.

But almost all of these studies have been observational, meaning they looked at people’s lives at a moment in time, determined how much they moved at that point, and later checked to see whether and when they passed away. Such studies can pinpoint associations between exercise and life spans, but they cannot prove that moving actually causes people to live longer, only that activity and longevity are linked.

To find out if exercise directly affects life spans, researchers would have to enroll volunteers in long-term, randomized controlled trials, with some people exercising, while others work out differently or not at all. The researchers then would have to follow all of these people for years, until a sufficiently large number died to allow for statistical comparisons of the groups.

Such studies, however, are dauntingly complicated and expensive, one reason they are rarely done. They may also be limited, since over the course of a typical experiment, few adults may die. This is providential for those who enroll in the study but problematic for the scientists hoping to study mortality; with scant deaths, they cannot tell if exercise is having a meaningful impact on life spans.

Those obstacles did not deter a group of exercise scientists at the Norwegian University of Science and Technology in Trondheim, Norway, however. With colleagues from other institutions, they had been studying the impacts of various types of exercise on heart disease and fitness and felt the obvious next step was to look at longevity. So, almost 10 years ago, they began planning the study that would be published in October [2020] in The BMJ.

. . .

The scientists tested everyone’s current aerobic fitness as well as their subjective feelings about the quality of their lives and then randomly assigned them to one of three groups. The first, as a control, agreed to follow standard activity guidelines and walk or otherwise remain in motion for half an hour most days. (The scientists did not feel they could ethically ask their control group to be sedentary for five years.)

Another group began exercising moderately for longer sessions of 50 minutes twice a week. And the third group started a program of twice-weekly high-intensity interval training, or H.I.I.T., during which they cycled or jogged at a strenuous pace for four minutes, followed by four minutes of rest, with that sequence repeated four times.

. . .

The men and women in the high-intensity-intervals group were about 2 percent less likely to have died than those in the control group, and 3 percent less likely to die than anyone in the longer, moderate-exercise group. People in the moderate group were, in fact, more likely to have passed away than people in the control group.

For the full story see:

Gretchen Reynolds. “Working Out With Intensity.” The New York Times (Tuesday, December 29, 2020 [sic]): D6.

(Note: ellipses, and bracketed year, added.)

(Note: the online version of the story was updated Nov. 10, 2021 [sic–yes 2021], and has the title “The Secret to Longevity? 4-Minute Bursts of Intense Exercise May Help.” Where the wording of the versions slightly differs, the passages quoted above follow the online version.)

The study published in The British Medical Journal (BMJ), and mentioned above, is:

Stensvold, Dorthe, Hallgeir Viken, Sigurd L. Steinshamn, Håvard Dalen, Asbjørn Støylen, Jan P. Loennechen, Line S. Reitlo, Nina Zisko, Fredrik H. Bækkerud, Atefe R. Tari, Silvana B. Sandbakk, Trude Carlsen, Jan E. Ingebrigtsen, Stian Lydersen, Erney Mattsson, Sigmund A. Anderssen, Maria A. Fiatarone Singh, Jeff S. Coombes, Eirik Skogvoll, Lars J. Vatten, Jorunn L. Helbostad, Øivind Rognmo, and Ulrik Wisløff. “Effect of Exercise Training for Five Years on All Cause Mortality in Older Adults—the Generation 100 Study: Randomised Controlled Trial.” BMJ 371 (2020): m3485.

The Cholera and Bubonic Plague Vaccination Campaigns of Waldemar Haffkine Count as Evidence of “the Benevolence of British Medical Imperialism”

(p. C7) “In the end, all history is natural history,” writes Simon Schama in “Foreign Bodies: Pandemics, Vaccines and the Health of Nations.” The author, a wide-ranging historian and an engaging television host, reconciles the weight of medical detail with the light-footed pleasures of narrative discovery. His book profiles some of the unsung miracle workers of modern vaccination, and offers a subtle rumination on borders political and biological.

. . .

Inoculation, Mr. Schama writes, became a “serious big business” in commercial England, despite the inoculators’ inability to understand how (p. C8) it worked, and despite Tory suspicions that the procedure meant “new-fangled,” possibly Jewish, interference in the divine plan. In 1764, the Italian medical professor Angelo Gatti published an impassioned defense of inoculation that demolished humoral theory. Mr. Schama calls Gatti an “unsung visionary of the Enlightenment.” His work was a boon to public health, though his findings met resistance in France, where the prerevolutionary medical establishment was more concerned with protecting its authority.

. . .

(p. C8) Mr. Schama alights on the story of Waldemar Haffkine, the Odessa-born Jew who created vaccines against cholera and bubonic plague. In 1892, Haffkine inoculated himself against cholera with the vaccine he had developed at the Institut Pasteur in Paris. He went on to inoculate thousands of Indians, and so effectively that his campaigns served as, in Mr. Schama’s words, “an advertisement for the benevolence of British medical imperialism.”

. . .

The author notes the contrast between the facts of Haffkine’s achievements and the response of the British establishment, with its modern echoes of the medieval fantasy that Jews were “demonic instigators of mass death.” Yet Mr. Schama’s skepticism of authority only extends so far. It would have been instructive to learn why, when Covid-19 appeared, the WHO concurred with Voltaire that the Chinese were “the wisest and best governed people in the world” and advised liberal democracies to emulate China’s lockdowns.

Haffkine’s colleague Ernest Hanbury Hankin once wrote an essay called “The Mental Limitations of the Expert.” Mr. Schama’s conclusion shows the limitations of our expert class, which appears not to understand the breach of public trust caused by the politicization of Covid policy and the suppression of public debate. You do not have to be “far right” to distrust mandatory mRNA vaccination. As Mr. Schama shows, the health of the body politic depends on scientific inquiry.

For the full review, see:

Dominic Green. “Protecting the Body Politic.” The Wall Street Journal (Saturday, Sept. 23, 2023): C7-C8.

(Note: ellipses added.)

(Note: the online version of the review has the date September 22, 2023, and has the title “‘Foreign Bodies’ Review: Migrant Microbes, Human Borders.”)

The book under review is:

Schama, Simon. Foreign Bodies: Pandemics, Vaccines, and the Health of Nations. New York: Ecco Press, 2023.

Observations of Non-Credentialed Citizens Add to “Scientific” Knowledge

(p. D5) In 1811, a 12-year-old girl named Mary Anning discovered a fossil on the beach near her home in southwestern England — the first scientifically identified specimen of an ichthyosaur, a dolphin-like, ocean-dwelling reptile from the time of the dinosaurs. Two centuries later, less than 50 miles away, an 11-year-old girl named Ruby Reynolds found a fossil from another ichthyosaur. It appears to be the largest marine reptile known to science.

Ms. Reynolds, now 15, and her father, Justin Reynolds, have been fossil hunting for 12 years near their home in Braunton, England. On a family outing in May 2020 to the village of Blue Anchor along the estuary of the River Severn, they came across a piece of fossilized bone set on a rock.

“We were both excited as we had never found a piece of fossilized bone as big as this before,” Mr. Reynolds said. His daughter kept searching the beach, he added, “and it wasn’t long before she found another much larger piece of bone.”

They took home the fragments of bone, the largest of which was about eight inches long, and began their research. A 2018 paper provided a hint at what they’d found: In nearby Lilstock, fossil hunters had discovered similar bone fragments, hypothesized to be part of the jaw bone of a massive ichthyosaur that lived roughly 202 million years ago. However, the scientists who’d worked on the Lilstock fossil had deemed that specimen too incomplete to designate a new species.

Mr. Reynolds contacted those researchers: Dean Lomax, at the University of Bristol, and Paul de la Salle, an amateur fossil collector. They joined the Reynolds family on collecting trips in Blue Anchor, digging in the mud with shovels. Ultimately, they found roughly half of a bone that they estimate would have been more than seven feet long when complete.

. . .

Dr. Lomax said that this discovery also highlighted the importance of amateur fossil collectors. “If you have a keen eye, if you have a passion for something like that, you can make discoveries like this,” he said.

Ruby Reynolds said: “I didn’t realize when I first found the piece of ichthyosaur bone how important it was and what it would lead to. I think the role that young people can play in science is to enjoy the journey of exploring as you never know where a discovery may take you.”

For the full story see:

Kate Golembiewski. “Huge Ocean Reptile From Dinosaur Days.” The New York Times (Tuesday, April 30, 2024): D5.

(Note: ellipses added.)

(Note: the online version of the story has the date April 17, 2024, and has the title “An 11-Year-Old Girl’s Fossil Find Is the Largest Known Ocean Reptile.” Where there is a difference in wording between the versions, the passages quoted above follow the online version.)

Lomax co-authored an article with Justin Reynolds and Ruby Reynolds that described and named the huge ocean reptile:

Lomax, Dean R., Paul de la Salle, Marcello Perillo, Justin Reynolds, Ruby Reynolds, and James F. Waldron. “The Last Giants: New Evidence for Giant Late Triassic (Rhaetian) Ichthyosaurs from the UK.” PLOS ONE 19, no. 4 (2024): e0300289.

Economical Parrots Decline an Immediate Smaller Treat to Be Able to Trade a Token for a Bigger Treat

(p. D3) Chalk up another achievement for parrots, . . . .

Anastasia Krasheninnikova and colleagues at the Max Planck Institute for Ornithology in Germany tested four species of parrots in an experiment that required trading tokens for food and recently reported their findings in the journal Scientific Reports.

. . .

A metal hoop could be traded for a piece of dry corn, the lowest value food, a metal bracket for a medium value sunflower seed and a plastic ring for the highest value food, a piece of shelled walnut.

The birds were then offered various choices, like a piece of corn or the ring. They all reliably chose to forgo the corn and take the ring. Then they were able to trade the ring for a piece of walnut.

They also did well choosing a bracket instead of the corn, and in other situations where the token was of higher value than the food.

For the full story see:

James Gorman. “Parrots Think They’re Pretty Smart.” The New York Times (Tuesday, Sept. 11, 2018 [sic]): D3.

(Note: ellipses added.)

(Note: the online version of the story has the same date as the print version, and has the title “Parrots Think They’re So Smart. Now They’re Bartering Tokens for Food.” Where there is a small difference in wording between the versions, the passages quoted above follow the online version.)

The paper published in Scientific Reports and mentioned above is:

Krasheninnikova, Anastasia, Friederike Höner, Laurie O’Neill, Elisabetta Penna, and Auguste M. P. von Bayern. “Economic Decision-Making in Parrots.” Scientific Reports 8, no. 1 (2018): 12537.

Repeated Interbreeding of Brown Bears and Polar Bears Illustrates Fuzziness of Defining a Species

(p. D1) Naturalists have been trying for centuries to catalog all of the species on Earth, and the effort remains one of the great unfinished jobs in science. So far, researchers have named about 2.3 million species, but there are millions — perhaps even billions — left to be discovered.

As if this quest isn’t hard enough, biologists cannot agree on what a species is. A 2021 survey found that practicing biologists used 16 different approaches to categorizing species. Any two of the scientists picked at random were overwhelmingly likely to use different ones.

“Everyone uses the term, but no one knows what it is,” said Michal Grabowski, a biologist at the University of Lodz in Poland.

The debate over species is more than an academic pastime. In the current extinction crisis, scientists urgently need to take stock of the world’s biological diversity.

. . .

(p. D4) As scientists gather more genetic data, fresh questions are emerging about what seem, on the surface, to be obviously separate species.

You don’t have to be a mammalogist to understand that polar bears and brown bears are different. Just one look at their white and brown coats will do.

The difference in their colors is the result of their ecological adaptations. White polar bears blend into their Arctic habitats, where they hunt for seals and other prey. Brown bears adapted for life on land further south. The differences are so distinct that paleontologists can distinguish fossils of the two species going back hundreds of thousands of years.

And yet the DNA inside those ancient bones is revealing an astonishing history of interbreeding between polar bears and brown bears. After the two lineages split about half a million years ago, they exchanged DNA for thousands of years. They then became more distinct, but about 120,000 years ago they underwent another extraordinary exchange of genes.

Between 25,000 and 10,000 years ago, the bears interbred in several parts of their range. The exchanges have left a significant imprint on bears today: About 10 percent of the DNA in brown bears comes from polar bears.

Beth Shapiro, a paleogeneticist at the University of California, Santa Cruz, said that the interbreeding most likely occurred when swings in the climate forced polar bears down from the Arctic and into brown bear territory.

For the full story see:

Carl Zimmer. “Defining A Species Is Open To Debate.” The New York Times (Tuesday, February 20, 2024): D1 & D4.

(Note: ellipsis added.)

(Note: the online version of the story has the date February 19, 2024, and has the title “What Is a Species, Anyway?”)

The 2021 survey mentioned above was more fully detailed in:

Stankowski, Sean, and Mark Ravinet. “Quantifying the Use of Species Concepts.” Current Biology 31, no. 9 (May 10, 2021): R428-R429.